Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.14■□□□□ 0.33
CHGBP05060 MIR557-201ENST00000385239 98 ntBASIC17.14■□□□□ 0.33
CHGBP05060 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHGBP05060 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.14■□□□□ 0.33
CHGBP05060 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 RN7SL769P-201ENST00000469386 295 ntBASIC17.14■□□□□ 0.33
CHGBP05060 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.14■□□□□ 0.33
CHGBP05060 AC005740.1-201ENST00000515639 522 ntBASIC17.14■□□□□ 0.33
CHGBP05060 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.14■□□□□ 0.33
CHGBP05060 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.14■□□□□ 0.33
CHGBP05060 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 AC006453.1-201ENST00000636037 1257 ntBASIC17.14■□□□□ 0.33
CHGBP05060 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.14■□□□□ 0.33
CHGBP05060 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHGBP05060 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHGBP05060 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHGBP05060 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.14■□□□□ 0.33
CHGBP05060 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHGBP05060 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHGBP05060 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHGBP05060 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHGBP05060 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHGBP05060 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.13■□□□□ 0.33
CHGBP05060 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.13■□□□□ 0.33
CHGBP05060 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.13■□□□□ 0.33
CHGBP05060 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHGBP05060 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.13■□□□□ 0.33
CHGBP05060 USP17L6P-201ENST00000382470 1197 ntBASIC17.13■□□□□ 0.33
CHGBP05060 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.13■□□□□ 0.33
CHGBP05060 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.13■□□□□ 0.33
CHGBP05060 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.13■□□□□ 0.33
CHGBP05060 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.13■□□□□ 0.33
CHGBP05060 RN7SL258P-201ENST00000478664 300 ntBASIC17.13■□□□□ 0.33
CHGBP05060 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.13■□□□□ 0.33
CHGBP05060 KRT8P1-201ENST00000557533 1207 ntBASIC17.13■□□□□ 0.33
CHGBP05060 RN7SL455P-201ENST00000580629 282 ntBASIC17.13■□□□□ 0.33
CHGBP05060 SIGLEC18P-201ENST00000602271 909 ntBASIC17.13■□□□□ 0.33
CHGBP05060 AC084346.2-201ENST00000607097 949 ntBASIC17.13■□□□□ 0.33
CHGBP05060 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CHGBP05060 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHGBP05060 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 AC068760.1-201ENST00000493579 1953 ntBASIC17.13■□□□□ 0.33
CHGBP05060 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHGBP05060 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
CHGBP05060 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.13■□□□□ 0.33
CHGBP05060 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHGBP05060 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.12■□□□□ 0.33
CHGBP05060 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 AL583805.1-201ENST00000391389 531 ntBASIC17.12■□□□□ 0.33
CHGBP05060 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 AC073869.2-201ENST00000417338 1026 ntBASIC17.12■□□□□ 0.33
CHGBP05060 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 AC234782.1-201ENST00000451950 919 ntBASIC17.12■□□□□ 0.33
CHGBP05060 AC008723.1-201ENST00000506922 207 ntBASIC17.12■□□□□ 0.33
CHGBP05060 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.12■□□□□ 0.33
CHGBP05060 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHGBP05060 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CHGBP05060 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.12■□□□□ 0.33
CHGBP05060 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.12■□□□□ 0.33
CHGBP05060 MIR4522-201ENST00000584932 87 ntBASIC17.12■□□□□ 0.33
CHGBP05060 AL021707.6-201ENST00000609212 491 ntBASIC17.12■□□□□ 0.33
CHGBP05060 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHGBP05060 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms