Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
OPHN1O60890 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
OPHN1O60890 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 AL928921.2-201ENST00000641325 2442 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 MAGEA5-201ENST00000446757 942 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 IMP3P2-201ENST00000489760 475 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.1■□□□□ 0.01
OPHN1O60890 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.1■□□□□ 0.01
OPHN1O60890 CHMP4BP1-201ENST00000556017 588 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.1■□□□□ 0.01
OPHN1O60890 AC106820.3-201ENST00000561653 397 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 MIR4706-201ENST00000582134 82 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 AC244157.2-201ENST00000616239 1006 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 KHSRPP1-201ENST00000427983 1768 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 AL590440.2-201ENST00000641973 1595 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
OPHN1O60890 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.1■□□□□ 0.01
OPHN1O60890 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.1■□□□□ 0.01
OPHN1O60890 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
OPHN1O60890 DMBT1P1-203ENST00000636837 4628 ntBASIC15.1■□□□□ 0.01
OPHN1O60890 AC131212.3-201ENST00000624087 4219 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
OPHN1O60890 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 AL023775.1-201ENST00000454907 1746 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.09■□□□□ 0.01
OPHN1O60890 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
OPHN1O60890 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.09■□□□□ 0.01
OPHN1O60890 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
OPHN1O60890 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.09■□□□□ 0.01
OPHN1O60890 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
OPHN1O60890 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.09■□□□□ 0.01
OPHN1O60890 CYP46A4P-201ENST00000414953 267 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 PUDPP3-201ENST00000445368 636 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 RPS2P36-201ENST00000456516 831 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.09■□□□□ 0.01
OPHN1O60890 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.09■□□□□ 0.01
OPHN1O60890 RN7SL720P-201ENST00000488178 304 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.09■□□□□ 0.01
OPHN1O60890 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.09■□□□□ 0.01
OPHN1O60890 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.09■□□□□ 0.01
OPHN1O60890 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
OPHN1O60890 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.09■□□□□ 0.01
OPHN1O60890 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
OPHN1O60890 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
OPHN1O60890 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
OPHN1O60890 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
OPHN1O60890 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.08■□□□□ 0.01
OPHN1O60890 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
OPHN1O60890 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms