Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN5O00501 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN5O00501 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN5O00501 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
CLDN5O00501 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 AC007952.5-201ENST00000572818 1486 ntBASIC15.09■□□□□ 0.01
CLDN5O00501 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN5O00501 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLDN5O00501 USP17L6P-201ENST00000382470 1197 ntBASIC15.09■□□□□ 0.01
CLDN5O00501 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 AC073869.2-201ENST00000417338 1026 ntBASIC15.09■□□□□ 0.01
CLDN5O00501 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN5O00501 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN5O00501 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CLDN5O00501 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN5O00501 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
CLDN5O00501 AC016629.1-201ENST00000596579 586 ntBASIC15.09■□□□□ 0.01
CLDN5O00501 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN5O00501 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN5O00501 KRT8P31-201ENST00000504812 1408 ntBASIC15.09■□□□□ 0.01
CLDN5O00501 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN5O00501 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN5O00501 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN5O00501 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN5O00501 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
CLDN5O00501 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN5O00501 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.08■□□□□ 0.01
CLDN5O00501 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.08■□□□□ 0.01
CLDN5O00501 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN5O00501 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CLDN5O00501 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN5O00501 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.08■□□□□ 0
CLDN5O00501 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLDN5O00501 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 AL627231.1-201ENST00000394467 1125 ntBASIC15.08■□□□□ 0
CLDN5O00501 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.08■□□□□ 0
CLDN5O00501 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.08■□□□□ 0
CLDN5O00501 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.08■□□□□ 0
CLDN5O00501 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.08■□□□□ 0
CLDN5O00501 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 SIGLEC18P-201ENST00000602271 909 ntBASIC15.08■□□□□ 0
CLDN5O00501 AC007326.1-201ENST00000604539 458 ntBASIC15.08■□□□□ 0
CLDN5O00501 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
CLDN5O00501 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CLDN5O00501 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.08■□□□□ 0
CLDN5O00501 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.08■□□□□ 0
CLDN5O00501 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN5O00501 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms