Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC36Q8IYA8 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 NDUFAB1P1-201ENST00000404262 460 ntBASIC13□□□□□ -0.33
CCDC36Q8IYA8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 FAM58BP-201ENST00000439056 645 ntBASIC13□□□□□ -0.33
CCDC36Q8IYA8 AC244107.1-201ENST00000442033 332 ntBASIC13□□□□□ -0.33
CCDC36Q8IYA8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 EEF1DP1-201ENST00000585891 896 ntBASIC13□□□□□ -0.33
CCDC36Q8IYA8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 AL008721.1-201ENST00000609964 604 ntBASIC13□□□□□ -0.33
CCDC36Q8IYA8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 PPT1-213ENST00000641319 2388 ntBASIC13□□□□□ -0.33
CCDC36Q8IYA8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13□□□□□ -0.33
CCDC36Q8IYA8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC36Q8IYA8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 REXO1L1P-201ENST00000379010 6598 ntBASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 TUBB1P2-201ENST00000422712 1306 ntBASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 TUBB1P1-201ENST00000503144 1300 ntBASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 RPS2P32-201ENST00000439199 892 ntBASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 PUDPP3-201ENST00000445368 636 ntBASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 CHMP1AP1-201ENST00000445563 662 ntBASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CCDC36Q8IYA8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms