Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 AL139158.3-201ENST00000641212 1562 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 AC111170.3-201ENST00000624282 2464 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 PPP1R2P4-201ENST00000424051 595 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 AL353637.1-201ENST00000451571 732 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 AC012618.1-201ENST00000461223 412 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 AC114947.1-202ENST00000514136 344 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 LINC01783-202ENST00000614408 828 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 BX284668.2-205ENST00000619677 828 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 AC138627.1-207ENST00000641560 1006 ntBASIC18.55■□□□□ 0.56
CCDC27Q2M243 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC27Q2M243 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC27Q2M243 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 AC006987.1-201ENST00000413610 527 ntBASIC18.54■□□□□ 0.56
CCDC27Q2M243 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 AL109837.1-201ENST00000603272 613 ntBASIC18.54■□□□□ 0.56
CCDC27Q2M243 AL353770.1-201ENST00000614915 403 ntBASIC18.54■□□□□ 0.56
CCDC27Q2M243 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 AC072061.1-201ENST00000569710 2234 ntBASIC18.54■□□□□ 0.56
CCDC27Q2M243 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC27Q2M243 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC27Q2M243 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms