Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IRX4P78413 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
IRX4P78413 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.09■□□□□ 0.01
IRX4P78413 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.09■□□□□ 0.01
IRX4P78413 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 EEF1DP6-201ENST00000449232 372 ntBASIC15.09■□□□□ 0.01
IRX4P78413 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.09■□□□□ 0.01
IRX4P78413 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.09■□□□□ 0.01
IRX4P78413 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.09■□□□□ 0.01
IRX4P78413 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.09■□□□□ 0.01
IRX4P78413 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.09■□□□□ 0.01
IRX4P78413 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.09■□□□□ 0.01
IRX4P78413 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.09■□□□□ 0.01
IRX4P78413 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
IRX4P78413 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.09■□□□□ 0.01
IRX4P78413 PRSS30P-206ENST00000641773 873 ntBASIC15.09■□□□□ 0.01
IRX4P78413 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.09■□□□□ 0.01
IRX4P78413 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 AC015802.1-201ENST00000588104 1449 ntBASIC15.09■□□□□ 0.01
IRX4P78413 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IRX4P78413 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IRX4P78413 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
IRX4P78413 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IRX4P78413 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IRX4P78413 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
IRX4P78413 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
IRX4P78413 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
IRX4P78413 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 MBLAC2-202ENST00000514906 1936 ntBASIC15.08■□□□□ 0
IRX4P78413 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
IRX4P78413 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 RPL17P11-201ENST00000417593 544 ntBASIC15.08■□□□□ 0
IRX4P78413 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.08■□□□□ 0
IRX4P78413 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
IRX4P78413 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.08■□□□□ 0
IRX4P78413 RN7SL574P-201ENST00000581512 297 ntBASIC15.08■□□□□ 0
IRX4P78413 AL133499.1-201ENST00000596207 608 ntBASIC15.08■□□□□ 0
IRX4P78413 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.08■□□□□ 0
IRX4P78413 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
IRX4P78413 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
IRX4P78413 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.08■□□□□ 0
IRX4P78413 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.08■□□□□ 0
IRX4P78413 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 KRT8P4-201ENST00000509735 1454 ntBASIC15.08■□□□□ 0
IRX4P78413 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IRX4P78413 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.07■□□□□ 0
IRX4P78413 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms