Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRB3P28472 MIR4259-201ENST00000584466 101 ntBASIC14.26□□□□□ -0.13
GABRB3P28472 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRB3P28472 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.26□□□□□ -0.13
GABRB3P28472 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GABRB3P28472 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GABRB3P28472 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
GABRB3P28472 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.26□□□□□ -0.13
GABRB3P28472 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRB3P28472 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
GABRB3P28472 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
GABRB3P28472 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 AC092580.1-201ENST00000433998 658 ntBASIC14.25□□□□□ -0.13
GABRB3P28472 VDAC1P1-201ENST00000439229 848 ntBASIC14.25□□□□□ -0.13
GABRB3P28472 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRB3P28472 SCARNA21-201ENST00000517026 139 ntBASIC14.25□□□□□ -0.13
GABRB3P28472 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRB3P28472 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRB3P28472 AC133540.1-201ENST00000620845 1019 ntBASIC14.25□□□□□ -0.13
GABRB3P28472 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.25□□□□□ -0.13
GABRB3P28472 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRB3P28472 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GABRB3P28472 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
GABRB3P28472 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GABRB3P28472 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GABRB3P28472 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 AC083964.2-201ENST00000623988 2396 ntBASIC14.24□□□□□ -0.13
GABRB3P28472 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.24□□□□□ -0.13
GABRB3P28472 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GABRB3P28472 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.24□□□□□ -0.13
GABRB3P28472 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
GABRB3P28472 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRB3P28472 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRB3P28472 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms