Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.51□□□□□ -0.09
KDELR3O43731 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.51□□□□□ -0.09
KDELR3O43731 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.51□□□□□ -0.09
KDELR3O43731 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 RN7SL720P-201ENST00000488178 304 ntBASIC14.51□□□□□ -0.09
KDELR3O43731 CHCHD2P2-201ENST00000503744 321 ntBASIC14.51□□□□□ -0.09
KDELR3O43731 GOLGA2P8-201ENST00000505201 779 ntBASIC14.51□□□□□ -0.09
KDELR3O43731 AC114947.1-202ENST00000514136 344 ntBASIC14.51□□□□□ -0.09
KDELR3O43731 ALG1L13P-202ENST00000519320 584 ntBASIC14.51□□□□□ -0.09
KDELR3O43731 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
KDELR3O43731 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.51□□□□□ -0.09
KDELR3O43731 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
KDELR3O43731 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
KDELR3O43731 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 KRT8P24-201ENST00000560290 1559 ntBASIC14.51□□□□□ -0.09
KDELR3O43731 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDELR3O43731 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
KDELR3O43731 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
KDELR3O43731 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 OR2K2-202ENST00000374428 1038 ntBASIC14.5□□□□□ -0.09
KDELR3O43731 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 AC006987.1-201ENST00000413610 527 ntBASIC14.5□□□□□ -0.09
KDELR3O43731 AC007274.2-201ENST00000421675 662 ntBASIC14.5□□□□□ -0.09
KDELR3O43731 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.5□□□□□ -0.09
KDELR3O43731 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.5□□□□□ -0.09
KDELR3O43731 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 AC012044.1-201ENST00000603431 297 ntBASIC14.5□□□□□ -0.09
KDELR3O43731 AC079336.7-201ENST00000623428 1078 ntBASIC14.5□□□□□ -0.09
KDELR3O43731 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KDELR3O43731 MST1P2-201ENST00000457982 2291 ntBASIC14.5□□□□□ -0.09
KDELR3O43731 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.5□□□□□ -0.09
KDELR3O43731 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.5□□□□□ -0.09
KDELR3O43731 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
KDELR3O43731 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 AC117489.1-201ENST00000625169 3217 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 AL157996.1-201ENST00000624684 2299 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
KDELR3O43731 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms