Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DEFA3P59666 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DEFA3P59666 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DEFA3P59666 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA3P59666 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 LINC02486-201ENST00000604157 3000 ntBASIC12.62□□□□□ -0.39
DEFA3P59666 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
DEFA3P59666 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA3P59666 AC142381.1-201ENST00000426099 345 ntBASIC12.62□□□□□ -0.39
DEFA3P59666 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.62□□□□□ -0.39
DEFA3P59666 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA3P59666 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA3P59666 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA3P59666 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA3P59666 AC023141.13-201ENST00000604991 943 ntBASIC12.62□□□□□ -0.39
DEFA3P59666 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA3P59666 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.62□□□□□ -0.39
DEFA3P59666 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DEFA3P59666 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
DEFA3P59666 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
DEFA3P59666 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 MRPL37P1-201ENST00000592451 1337 ntBASIC12.62□□□□□ -0.39
DEFA3P59666 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA3P59666 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
DEFA3P59666 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 AC092117.1-201ENST00000621230 3250 ntBASIC12.61□□□□□ -0.39
DEFA3P59666 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.61□□□□□ -0.39
DEFA3P59666 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA3P59666 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA3P59666 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA3P59666 AC105339.3-201ENST00000560043 636 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms