RNA–Protein interactions for RNA: ENST00000317447.8

ACSF3-201, Transcript of acyl-CoA synthetase family member 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ACSF3, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-201ENST00000317447 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
ACSF3-201ENST00000317447 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
ACSF3-201ENST00000317447 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
ACSF3-201ENST00000317447 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
ACSF3-201ENST00000317447 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
ACSF3-201ENST00000317447 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.01
ACSF3-201ENST00000317447 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
ACSF3-201ENST00000317447 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
ACSF3-201ENST00000317447 LOC105371045A0A1W2PR82 267 aa21.14■□□□□ 0.97
ACSF3-201ENST00000317447 HRCP23327 699 aa21.12■□□□□ 0.97
ACSF3-201ENST00000317447 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
ACSF3-201ENST00000317447 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
ACSF3-201ENST00000317447 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
ACSF3-201ENST00000317447 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
ACSF3-201ENST00000317447 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
ACSF3-201ENST00000317447 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
ACSF3-201ENST00000317447 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
ACSF3-201ENST00000317447 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
ACSF3-201ENST00000317447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
ACSF3-201ENST00000317447 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
ACSF3-201ENST00000317447 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
ACSF3-201ENST00000317447 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
ACSF3-201ENST00000317447 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
ACSF3-201ENST00000317447 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
ACSF3-201ENST00000317447 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
ACSF3-201ENST00000317447 ABCC9O60706 1549 aa19.87■□□□□ 0.77
ACSF3-201ENST00000317447 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
ACSF3-201ENST00000317447 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
ACSF3-201ENST00000317447 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
ACSF3-201ENST00000317447 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
ACSF3-201ENST00000317447 CENPBP07199 599 aaPredicted RBP19.68■□□□□ 0.74
ACSF3-201ENST00000317447 APLP2Q06481 763 aa19.63■□□□□ 0.73
ACSF3-201ENST00000317447 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
ACSF3-201ENST00000317447 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
ACSF3-201ENST00000317447 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.73
ACSF3-201ENST00000317447 NEUROD1Q13562 356 aa19.57■□□□□ 0.72
ACSF3-201ENST00000317447 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
ACSF3-201ENST00000317447 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
ACSF3-201ENST00000317447 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
ACSF3-201ENST00000317447 ITGAEP38570 1179 aa19.37■□□□□ 0.69
ACSF3-201ENST00000317447 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.69
ACSF3-201ENST00000317447 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
ACSF3-201ENST00000317447 ZNF316A6NFI3 1004 aaPredicted RBP19.28■□□□□ 0.68
ACSF3-201ENST00000317447 ATP1B4Q9UN42 357 aaPredicted RBP19.21■□□□□ 0.67
ACSF3-201ENST00000317447 WIZO95785 1651 aa19.18■□□□□ 0.66
ACSF3-201ENST00000317447 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
ACSF3-201ENST00000317447 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
ACSF3-201ENST00000317447 SOGA1O94964 1423 aa19.17■□□□□ 0.66
ACSF3-201ENST00000317447 MIER1Q8N108 512 aa19.17■□□□□ 0.66
ACSF3-201ENST00000317447 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
ACSF3-201ENST00000317447 RUSC2Q8N2Y8 1516 aa18.99■□□□□ 0.63
ACSF3-201ENST00000317447 NACADO15069 1562 aa18.94■□□□□ 0.62
ACSF3-201ENST00000317447 BCANQ96GW7 911 aa18.94■□□□□ 0.62
ACSF3-201ENST00000317447 TNIKQ9UKE5 1360 aa18.92■□□□□ 0.62
ACSF3-201ENST00000317447 CLIP1P30622 1438 aa18.88■□□□□ 0.61
ACSF3-201ENST00000317447 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
ACSF3-201ENST00000317447 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
ACSF3-201ENST00000317447 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
ACSF3-201ENST00000317447 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
ACSF3-201ENST00000317447 FAM50AQ14320 339 aaKnown RBP18.81■□□□□ 0.6
ACSF3-201ENST00000317447 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.59
ACSF3-201ENST00000317447 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
ACSF3-201ENST00000317447 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
ACSF3-201ENST00000317447 EEA1Q15075 1411 aa18.67■□□□□ 0.58
ACSF3-201ENST00000317447 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
ACSF3-201ENST00000317447 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
ACSF3-201ENST00000317447 NEFLP07196 543 aa18.63■□□□□ 0.57
ACSF3-201ENST00000317447 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
ACSF3-201ENST00000317447 MYT1Q01538 1121 aa18.61■□□□□ 0.57
ACSF3-201ENST00000317447 SMARCA2P51531 1590 aa18.58■□□□□ 0.57
ACSF3-201ENST00000317447 RAPGEF2Q9Y4G8 1499 aa18.57■□□□□ 0.56
ACSF3-201ENST00000317447 KCNH8Q96L42 1107 aa18.56■□□□□ 0.56
ACSF3-201ENST00000317447 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
ACSF3-201ENST00000317447 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
ACSF3-201ENST00000317447 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
ACSF3-201ENST00000317447 FKBP8Q14318 412 aa18.54■□□□□ 0.56
ACSF3-201ENST00000317447 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
ACSF3-201ENST00000317447 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.55
ACSF3-201ENST00000317447 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
ACSF3-201ENST00000317447 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
ACSF3-201ENST00000317447 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
ACSF3-201ENST00000317447 ANP32CO43423 234 aa18.39■□□□□ 0.54
ACSF3-201ENST00000317447 DHX57Q6P158 1386 aaKnown RBP18.39■□□□□ 0.53
ACSF3-201ENST00000317447 IRX6P78412 446 aaPredicted RBP18.39■□□□□ 0.53
ACSF3-201ENST00000317447 ERICH6Q7L0X2 663 aa18.36■□□□□ 0.53
ACSF3-201ENST00000317447 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
ACSF3-201ENST00000317447 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.52
ACSF3-201ENST00000317447 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
ACSF3-201ENST00000317447 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
ACSF3-201ENST00000317447 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
ACSF3-201ENST00000317447 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
ACSF3-201ENST00000317447 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
ACSF3-201ENST00000317447 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
ACSF3-201ENST00000317447 KIF21BO75037 1637 aa18.26■□□□□ 0.51
ACSF3-201ENST00000317447 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
ACSF3-201ENST00000317447 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
ACSF3-201ENST00000317447 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
ACSF3-201ENST00000317447 TONSLQ96HA7 1378 aa18.22■□□□□ 0.51
ACSF3-201ENST00000317447 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
ACSF3-201ENST00000317447 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms