Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RN7SL363P-201ENST00000482412 273 ntBASIC15.52■□□□□ 0.07
HTTP42858 RN7SL47P-201ENST00000488710 299 ntBASIC15.52■□□□□ 0.07
HTTP42858 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.52■□□□□ 0.07
HTTP42858 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.52■□□□□ 0.07
HTTP42858 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HTTP42858 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HTTP42858 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.51■□□□□ 0.07
HTTP42858 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC15.51■□□□□ 0.07
HTTP42858 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC15.51■□□□□ 0.07
HTTP42858 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC15.51■□□□□ 0.07
HTTP42858 AC113398.1-201ENST00000464124 406 ntBASIC15.51■□□□□ 0.07
HTTP42858 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 HNRNPA1P59-201ENST00000430583 918 ntBASIC15.51■□□□□ 0.07
HTTP42858 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC15.51■□□□□ 0.07
HTTP42858 DDX11L8-201ENST00000535849 366 ntBASIC15.51■□□□□ 0.07
HTTP42858 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.51■□□□□ 0.07
HTTP42858 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HTTP42858 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.51■□□□□ 0.07
HTTP42858 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 AC011477.7-201ENST00000617163 1440 ntBASIC15.51■□□□□ 0.07
HTTP42858 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HTTP42858 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.5■□□□□ 0.07
HTTP42858 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 AC000078.1-201ENST00000420617 682 ntBASIC15.5■□□□□ 0.07
HTTP42858 AC092865.2-201ENST00000439409 971 ntBASIC15.5■□□□□ 0.07
HTTP42858 HNRNPA1P73-201ENST00000446472 928 ntBASIC15.5■□□□□ 0.07
HTTP42858 KRT18P42-201ENST00000505048 1255 ntBASIC15.5■□□□□ 0.07
HTTP42858 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
HTTP42858 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HTTP42858 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC15.5■□□□□ 0.07
HTTP42858 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 METTL7AP1-201ENST00000547343 496 ntBASIC15.5■□□□□ 0.07
HTTP42858 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC15.5■□□□□ 0.07
HTTP42858 MIR4326-201ENST00000582203 59 ntBASIC15.5■□□□□ 0.07
HTTP42858 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC15.5■□□□□ 0.07
HTTP42858 FAM223B-202ENST00000598177 713 ntBASIC15.5■□□□□ 0.07
HTTP42858 FAM223A-202ENST00000625204 713 ntBASIC15.5■□□□□ 0.07
HTTP42858 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.5■□□□□ 0.07
HTTP42858 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HTTP42858 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.5■□□□□ 0.07
HTTP42858 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HTTP42858 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.5■□□□□ 0.07
HTTP42858 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.5■□□□□ 0.07
HTTP42858 TPT1P11-201ENST00000458482 498 ntBASIC15.5■□□□□ 0.07
HTTP42858 MIR4459-201ENST00000581837 66 ntBASIC15.5■□□□□ 0.07
HTTP42858 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.49■□□□□ 0.07
HTTP42858 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTTP42858 NDUFB2P1-201ENST00000506966 295 ntBASIC15.49■□□□□ 0.07
HTTP42858 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.49■□□□□ 0.07
HTTP42858 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 PSME3-213ENST00000592169 826 ntTSL 3 BASIC15.49■□□□□ 0.07
HTTP42858 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC15.49■□□□□ 0.07
HTTP42858 CICP14-201ENST00000629111 2732 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms