Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
USP6P35125 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 AC106827.1-201ENST00000366454 431 ntBASIC18.95■□□□□ 0.62
USP6P35125 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 AL080243.1-201ENST00000423293 1060 ntBASIC18.95■□□□□ 0.62
USP6P35125 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.95■□□□□ 0.62
USP6P35125 ZNF877P-201ENST00000437614 612 ntBASIC18.95■□□□□ 0.62
USP6P35125 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.95■□□□□ 0.62
USP6P35125 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 PKD1P1-201ENST00000458669 6805 ntBASIC18.95■□□□□ 0.62
USP6P35125 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 RCC2P1-201ENST00000452257 1476 ntBASIC18.95■□□□□ 0.62
USP6P35125 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP6P35125 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
USP6P35125 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.95■□□□□ 0.62
USP6P35125 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USP6P35125 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP6P35125 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.94■□□□□ 0.62
USP6P35125 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 RPL3P5-201ENST00000441645 1232 ntBASIC18.94■□□□□ 0.62
USP6P35125 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.94■□□□□ 0.62
USP6P35125 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USP6P35125 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.94■□□□□ 0.62
USP6P35125 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.94■□□□□ 0.62
USP6P35125 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC18.94■□□□□ 0.62
USP6P35125 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 Z98885.3-201ENST00000624882 1757 ntBASIC18.94■□□□□ 0.62
USP6P35125 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.94■□□□□ 0.62
USP6P35125 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
USP6P35125 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP6P35125 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.94■□□□□ 0.62
USP6P35125 TNRC18P2-201ENST00000417666 2714 ntBASIC18.94■□□□□ 0.62
USP6P35125 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.93■□□□□ 0.62
USP6P35125 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC18.93■□□□□ 0.62
USP6P35125 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP6P35125 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC18.93■□□□□ 0.62
USP6P35125 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP6P35125 AC092570.1-201ENST00000414446 469 ntBASIC18.93■□□□□ 0.62
USP6P35125 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.93■□□□□ 0.62
USP6P35125 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 AC079250.1-201ENST00000456046 531 ntBASIC18.93■□□□□ 0.62
USP6P35125 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC18.93■□□□□ 0.62
USP6P35125 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.93■□□□□ 0.62
USP6P35125 AL139424.3-202ENST00000641619 917 ntBASIC18.93■□□□□ 0.62
USP6P35125 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP6P35125 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP6P35125 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
USP6P35125 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.92■□□□□ 0.62
USP6P35125 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.92■□□□□ 0.62
USP6P35125 RPL10-203ENST00000406022 748 ntTSL 3 BASIC18.92■□□□□ 0.62
USP6P35125 PGAM1P11-201ENST00000416729 680 ntBASIC18.92■□□□□ 0.62
USP6P35125 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms