Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CCL3P10147 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL3P10147 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.06□□□□□ -0.32
CCL3P10147 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.06□□□□□ -0.32
CCL3P10147 SIGLEC18P-201ENST00000602271 909 ntBASIC13.06□□□□□ -0.32
CCL3P10147 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL3P10147 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CCL3P10147 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCL3P10147 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL3P10147 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL3P10147 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL3P10147 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL3P10147 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CCL3P10147 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL3P10147 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 MARK2P16-201ENST00000605714 1723 ntBASIC13.05□□□□□ -0.32
CCL3P10147 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CCL3P10147 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL3P10147 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL3P10147 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 AL512310.5-201ENST00000551999 515 ntBASIC13.05□□□□□ -0.32
CCL3P10147 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL3P10147 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL3P10147 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 AL353726.2-201ENST00000623259 884 ntBASIC13.05□□□□□ -0.32
CCL3P10147 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CCL3P10147 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCL3P10147 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL3P10147 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCL3P10147 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCL3P10147 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3P10147 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 FGFR3P1-201ENST00000449999 601 ntBASIC13.04□□□□□ -0.32
CCL3P10147 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL3P10147 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL3P10147 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CCL3P10147 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms