Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VTNP04004 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.67■□□□□ 0.1
VTNP04004 AC006987.1-201ENST00000413610 527 ntBASIC15.67■□□□□ 0.1
VTNP04004 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 ERP29P1-201ENST00000442902 706 ntBASIC15.67■□□□□ 0.1
VTNP04004 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.67■□□□□ 0.1
VTNP04004 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.67■□□□□ 0.1
VTNP04004 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 TMCO5B-205ENST00000530020 894 ntBASIC15.67■□□□□ 0.1
VTNP04004 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.67■□□□□ 0.1
VTNP04004 NDUFB10P1-201ENST00000567319 521 ntBASIC15.67■□□□□ 0.1
VTNP04004 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 MIR4649-201ENST00000582839 64 ntBASIC15.67■□□□□ 0.1
VTNP04004 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.67■□□□□ 0.1
VTNP04004 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 SIGLEC22P-201ENST00000599104 714 ntBASIC15.67■□□□□ 0.1
VTNP04004 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.67■□□□□ 0.1
VTNP04004 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 AC015802.1-201ENST00000588104 1449 ntBASIC15.67■□□□□ 0.1
VTNP04004 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
VTNP04004 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VTNP04004 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VTNP04004 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 GUSBP10-201ENST00000417412 665 ntBASIC15.66■□□□□ 0.1
VTNP04004 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.66■□□□□ 0.1
VTNP04004 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.66■□□□□ 0.1
VTNP04004 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.66■□□□□ 0.1
VTNP04004 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 AL512310.5-201ENST00000551999 515 ntBASIC15.66■□□□□ 0.1
VTNP04004 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.66■□□□□ 0.1
VTNP04004 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 AC005041.3-201ENST00000606287 649 ntBASIC15.66■□□□□ 0.1
VTNP04004 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.66■□□□□ 0.1
VTNP04004 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.66■□□□□ 0.1
VTNP04004 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VTNP04004 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms