Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.9□□□□□ -0.34
ZIC3O60481 RN7SL67P-201ENST00000492147 296 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 AC114947.1-202ENST00000514136 344 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 ALG1L13P-202ENST00000519320 584 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZIC3O60481 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZIC3O60481 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 KRT8P19-201ENST00000551916 1455 ntBASIC12.9□□□□□ -0.34
ZIC3O60481 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC3O60481 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC3O60481 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ZIC3O60481 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC3O60481 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.89□□□□□ -0.35
ZIC3O60481 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC3O60481 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 AC234782.1-201ENST00000451950 919 ntBASIC12.89□□□□□ -0.35
ZIC3O60481 CEP164P1-201ENST00000455142 418 ntBASIC12.89□□□□□ -0.35
ZIC3O60481 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
ZIC3O60481 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 MIR3907-201ENST00000579424 151 ntBASIC12.89□□□□□ -0.35
ZIC3O60481 AC007718.1-201ENST00000621078 280 ntBASIC12.89□□□□□ -0.35
ZIC3O60481 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZIC3O60481 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ZIC3O60481 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC3O60481 LINC01230-201ENST00000625222 3017 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 OR2I1P-210ENST00000642037 4691 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 AL136379.1-201ENST00000623471 2642 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms