Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 LAP3P2-201ENST00000454686 1454 ntBASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 AC239868.1-201ENST00000369385 493 ntBASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 IGLV3-15-201ENST00000518356 244 ntBASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 MIR3188-201ENST00000583494 85 ntBASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 SPCS2P2-201ENST00000603270 608 ntBASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 AC090386.2-201ENST00000623010 1039 ntBASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP6V0A4Q9HBG4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC116345.2-201ENST00000512837 523 ntBASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 POU5F1P2-201ENST00000521750 823 ntBASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC006453.1-201ENST00000636037 1257 ntBASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP6V0A4Q9HBG4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP6V0A4Q9HBG4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms