Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 AC002350.2-201ENST00000623894 1828 ntBASIC20.46■□□□□ 0.87
ARHGEF40Q8TER5 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 NOS2P3-201ENST00000411468 867 ntBASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 NOS2P2-201ENST00000426269 867 ntBASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 RN7SL677P-201ENST00000466970 319 ntBASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 RN7SL638P-201ENST00000494527 290 ntBASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 AC245369.8-201ENST00000636589 306 ntBASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC20.45■□□□□ 0.86
ARHGEF40Q8TER5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 HNRNPA1P73-201ENST00000446472 928 ntBASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 PPT1-215ENST00000641471 2368 ntBASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ARHGEF40Q8TER5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 HNRNPA1P59-201ENST00000430583 918 ntBASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 SNORA47-201ENST00000458862 138 ntBASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AC104115.1-201ENST00000484005 623 ntBASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AC022382.1-201ENST00000602768 336 ntBASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 AC089987.1-201ENST00000551654 2209 ntBASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 TUBB4AP1-201ENST00000450755 1325 ntBASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ARHGEF40Q8TER5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms