Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD5Q8TDI0 AGAP10P-201ENST00000454844 2418 ntBASIC14.35□□□□□ -0.11
CHD5Q8TDI0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 STK24P1-201ENST00000455035 1291 ntBASIC14.35□□□□□ -0.11
CHD5Q8TDI0 TMEM198B-204ENST00000484016 896 ntBASIC14.35□□□□□ -0.11
CHD5Q8TDI0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 AL590824.1-201ENST00000403828 1349 ntBASIC14.35□□□□□ -0.11
CHD5Q8TDI0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CHD5Q8TDI0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 RPL3P2-204ENST00000413027 1203 ntBASIC14.34□□□□□ -0.11
CHD5Q8TDI0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 CHCHD2P9-201ENST00000461726 456 ntBASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AC130709.1-201ENST00000484779 1212 ntBASIC14.34□□□□□ -0.11
CHD5Q8TDI0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AC016629.1-201ENST00000596579 586 ntBASIC14.34□□□□□ -0.11
CHD5Q8TDI0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AL391647.1-201ENST00000395664 511 ntBASIC14.34□□□□□ -0.11
CHD5Q8TDI0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.34□□□□□ -0.11
CHD5Q8TDI0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHD5Q8TDI0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms