Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 TSSK5P-201ENST00000423978 907 ntBASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 AC136604.1-202ENST00000425471 771 ntBASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 AC135586.1-201ENST00000539323 574 ntBASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 AL445250.1-201ENST00000641671 2259 ntBASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CICP1-201ENST00000416803 2410 ntBASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.32□□□□□ -0.12
RFWD2Q8NHY2 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 AC022144.1-201ENST00000602255 1580 ntBASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.31□□□□□ -0.12
RFWD2Q8NHY2 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 AC073869.1-201ENST00000415574 2762 ntBASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 LINC00567-201ENST00000569854 3409 ntBASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFWD2Q8NHY2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms