Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 HLA-K-203ENST00000430151 1046 ntBASIC12.03□□□□□ -0.48
ZNF546Q86UE3 AC009078.2-202ENST00000463353 338 ntBASIC12.03□□□□□ -0.48
ZNF546Q86UE3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 AC008620.2-201ENST00000510294 1569 ntBASIC12.03□□□□□ -0.48
ZNF546Q86UE3 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 FAM90A11P-201ENST00000518378 2218 ntBASIC12.03□□□□□ -0.48
ZNF546Q86UE3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF546Q86UE3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.02□□□□□ -0.48
ZNF546Q86UE3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AC015922.1-201ENST00000421102 1152 ntBASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 BANF1P1-201ENST00000553684 263 ntBASIC12.02□□□□□ -0.49
ZNF546Q86UE3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF546Q86UE3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms