Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 SALL4P5-201ENST00000419001 1760 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 PDIA3P1-201ENST00000471856 1510 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 GK-202ENST00000378941 458 ntTSL 3 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AC103988.2-201ENST00000561804 725 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AL590560.3-201ENST00000623350 461 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 LINC00638-201ENST00000555578 2518 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AC022144.1-201ENST00000602255 1580 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 AC124319.4-201ENST00000622931 2161 ntBASIC16.16■□□□□ 0.18
HS1BP3Q53T59 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HS1BP3Q53T59 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CRB3P1-201ENST00000449338 276 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 HLA-V-204ENST00000476601 1289 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AC004890.2-204ENST00000481968 304 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AC105021.1-202ENST00000570572 669 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 PCDHB17P-202ENST00000623466 3066 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 AC064801.2-201ENST00000625052 1303 ntBASIC16.15■□□□□ 0.18
HS1BP3Q53T59 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HS1BP3Q53T59 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HS1BP3Q53T59 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HS1BP3Q53T59 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HS1BP3Q53T59 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HS1BP3Q53T59 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
HS1BP3Q53T59 CETN4P-206ENST00000642099 2168 ntBASIC16.14■□□□□ 0.17
HS1BP3Q53T59 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HS1BP3Q53T59 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms