Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CACNA1DQ01668 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CACNA1DQ01668 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CACNA1DQ01668 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CACNA1DQ01668 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.35
CACNA1DQ01668 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
CACNA1DQ01668 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
CACNA1DQ01668 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CACNA1DQ01668 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.83□□□□□ -0.35
CACNA1DQ01668 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CACNA1DQ01668 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AC023090.2-201ENST00000625182 2110 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 BAK1P1-201ENST00000317045 636 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 MIR557-201ENST00000385239 98 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 AL592076.1-201ENST00000424448 303 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 AC083801.1-201ENST00000491689 358 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PHBP15-201ENST00000574228 665 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PEBP1P2-201ENST00000603980 558 ntBASIC12.83□□□□□ -0.36
CACNA1DQ01668 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CACNA1DQ01668 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.83□□□□□ -0.36
CACNA1DQ01668 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CACNA1DQ01668 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms