Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDHB1Q9Y5F3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.46□□□□□ -0.1
PCDHB1Q9Y5F3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHB1Q9Y5F3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 FAM58BP-201ENST00000439056 645 ntBASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AC008267.1-201ENST00000474858 1069 ntBASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AL161670.2-201ENST00000557650 1227 ntBASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AC104506.1-201ENST00000609247 429 ntBASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AL805961.1-203ENST00000641078 1258 ntBASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 HSPA8P5-201ENST00000456928 2069 ntBASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHB1Q9Y5F3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 AC004899.1-201ENST00000424687 1714 ntBASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 RN7SL163P-201ENST00000583100 276 ntBASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 AC009955.4-201ENST00000597192 544 ntBASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCDHB1Q9Y5F3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms