Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 AL031673.1-201ENST00000611460 466 ntBASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 AHCYP3-201ENST00000420053 1279 ntBASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 MAGEA7P-201ENST00000436482 942 ntBASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 URB1-AS1-201ENST00000534991 831 ntBASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 AC132825.4-202ENST00000578792 434 ntBASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM43Q96BQ3 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 AC215219.1-201ENST00000400706 1817 ntBASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 DOC2GP-204ENST00000639052 2548 ntBASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 RPL13AP3-202ENST00000494676 1473 ntBASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 AC147876.1-201ENST00000504408 322 ntBASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 AL357143.1-203ENST00000639750 881 ntBASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM43Q96BQ3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms