Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
CLDND2Q8NHS1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 PPT1-213ENST00000641319 2388 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 RPL18P13-201ENST00000478088 569 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 RNA5SP423-201ENST00000517127 109 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AC091812.3-201ENST00000621362 345 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AL805961.1-203ENST00000641078 1258 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AL122018.1-201ENST00000446607 2310 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 AC244394.1-201ENST00000435000 1665 ntBASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.35□□□□□ -0.43
CLDND2Q8NHS1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLDND2Q8NHS1 AC012441.2-201ENST00000444843 739 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms