Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 AC007274.1-201ENST00000439805 662 ntBASIC15.52■□□□□ 0.08
PPP3CAQ08209 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 AL136295.7-201ENST00000619226 1200 ntBASIC15.52■□□□□ 0.08
PPP3CAQ08209 MIR6869-201ENST00000619434 62 ntBASIC15.52■□□□□ 0.08
PPP3CAQ08209 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PPP3CAQ08209 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PPP3CAQ08209 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PPP3CAQ08209 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PPP3CAQ08209 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PPP3CAQ08209 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PPP3CAQ08209 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PPP3CAQ08209 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PPP3CAQ08209 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PPP3CAQ08209 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PPP3CAQ08209 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.52■□□□□ 0.07
PPP3CAQ08209 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 LINC00115-201ENST00000473798 1317 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 AC006033.1-201ENST00000440505 426 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 KRT18P15-201ENST00000458108 1291 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 AC092658.1-201ENST00000505836 891 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 AL022328.3-201ENST00000607943 679 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 CICP4-201ENST00000447359 2812 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 AC130686.1-201ENST00000622936 2466 ntBASIC15.51■□□□□ 0.07
PPP3CAQ08209 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.51■□□□□ 0.07
PPP3CAQ08209 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PPP3CAQ08209 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.5■□□□□ 0.07
PPP3CAQ08209 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CAQ08209 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CAQ08209 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms