Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM23P36406 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM23P36406 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM23P36406 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 AL583805.1-201ENST00000391389 531 ntBASIC14.16□□□□□ -0.14
TRIM23P36406 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM23P36406 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM23P36406 AL592076.1-201ENST00000424448 303 ntBASIC14.16□□□□□ -0.14
TRIM23P36406 RPL8P2-201ENST00000430538 502 ntBASIC14.16□□□□□ -0.14
TRIM23P36406 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM23P36406 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM23P36406 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM23P36406 AC103810.10-201ENST00000606504 343 ntBASIC14.16□□□□□ -0.14
TRIM23P36406 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRIM23P36406 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 AC005912.2-201ENST00000619492 2400 ntBASIC14.16□□□□□ -0.14
TRIM23P36406 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 AC007952.5-201ENST00000572818 1486 ntBASIC14.16□□□□□ -0.14
TRIM23P36406 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM23P36406 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM23P36406 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRIM23P36406 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 MARK2P16-201ENST00000605714 1723 ntBASIC14.15□□□□□ -0.14
TRIM23P36406 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM23P36406 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
TRIM23P36406 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRIM23P36406 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
TRIM23P36406 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM23P36406 OR8T1P-201ENST00000421347 918 ntBASIC14.15□□□□□ -0.14
TRIM23P36406 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM23P36406 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 AC130709.1-201ENST00000484779 1212 ntBASIC14.15□□□□□ -0.14
TRIM23P36406 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms