Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.42■□□□□ 0.06
HOXC8P31273 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.42■□□□□ 0.06
HOXC8P31273 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.42■□□□□ 0.06
HOXC8P31273 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.42■□□□□ 0.06
HOXC8P31273 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.42■□□□□ 0.06
HOXC8P31273 GOLGA2P7-209ENST00000560408 745 ntBASIC15.42■□□□□ 0.06
HOXC8P31273 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.42■□□□□ 0.06
HOXC8P31273 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.42■□□□□ 0.06
HOXC8P31273 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
HOXC8P31273 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
HOXC8P31273 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 PES1P2-201ENST00000449745 1735 ntBASIC15.42■□□□□ 0.06
HOXC8P31273 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HOXC8P31273 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HOXC8P31273 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.41■□□□□ 0.06
HOXC8P31273 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.41■□□□□ 0.06
HOXC8P31273 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HOXC8P31273 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.41■□□□□ 0.06
HOXC8P31273 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.41■□□□□ 0.06
HOXC8P31273 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 GGTLC4P-201ENST00000402176 664 ntBASIC15.41■□□□□ 0.06
HOXC8P31273 FAM21EP-201ENST00000417804 985 ntBASIC15.41■□□□□ 0.06
HOXC8P31273 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.41■□□□□ 0.06
HOXC8P31273 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.41■□□□□ 0.06
HOXC8P31273 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.41■□□□□ 0.06
HOXC8P31273 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.41■□□□□ 0.06
HOXC8P31273 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.41■□□□□ 0.06
HOXC8P31273 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.41■□□□□ 0.06
HOXC8P31273 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.41■□□□□ 0.06
HOXC8P31273 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HOXC8P31273 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HOXC8P31273 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HOXC8P31273 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
HOXC8P31273 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HOXC8P31273 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HOXC8P31273 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HOXC8P31273 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 MIR566-201ENST00000385187 94 ntBASIC15.4■□□□□ 0.06
HOXC8P31273 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HOXC8P31273 ABCD1P4-201ENST00000399687 604 ntBASIC15.4■□□□□ 0.06
HOXC8P31273 DKKL1P1-201ENST00000400550 698 ntBASIC15.4■□□□□ 0.06
HOXC8P31273 ACTBP14-201ENST00000411655 1089 ntBASIC15.4■□□□□ 0.06
HOXC8P31273 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 AC026470.1-201ENST00000478038 846 ntBASIC15.4■□□□□ 0.06
HOXC8P31273 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.4■□□□□ 0.06
HOXC8P31273 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.4■□□□□ 0.06
HOXC8P31273 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.4■□□□□ 0.06
HOXC8P31273 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.4■□□□□ 0.06
HOXC8P31273 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HOXC8P31273 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms