Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TOP1P11387 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.98■□□□□ 0.31
TOP1P11387 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP1P11387 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP1P11387 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP1P11387 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.98■□□□□ 0.31
TOP1P11387 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP1P11387 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TOP1P11387 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP1P11387 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TOP1P11387 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TOP1P11387 AC239868.1-201ENST00000369385 493 ntBASIC16.97■□□□□ 0.31
TOP1P11387 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 ISCA2P1-201ENST00000425548 448 ntBASIC16.97■□□□□ 0.31
TOP1P11387 AL161932.2-201ENST00000435436 679 ntBASIC16.97■□□□□ 0.31
TOP1P11387 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP1P11387 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP1P11387 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.97■□□□□ 0.31
TOP1P11387 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP1P11387 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.97■□□□□ 0.31
TOP1P11387 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.97■□□□□ 0.31
TOP1P11387 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP1P11387 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TOP1P11387 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP1P11387 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP1P11387 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 AC006335.1-201ENST00000445200 547 ntBASIC16.96■□□□□ 0.31
TOP1P11387 AC012618.1-201ENST00000461223 412 ntBASIC16.96■□□□□ 0.31
TOP1P11387 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 CU633904.3-201ENST00000624042 1029 ntBASIC16.96■□□□□ 0.31
TOP1P11387 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP1P11387 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP1P11387 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.96■□□□□ 0.31
TOP1P11387 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP1P11387 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.96■□□□□ 0.3
TOP1P11387 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TOP1P11387 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.96■□□□□ 0.3
TOP1P11387 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP1P11387 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TOP1P11387 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TOP1P11387 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.96■□□□□ 0.3
TOP1P11387 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.95■□□□□ 0.3
TOP1P11387 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 AP001267.2-201ENST00000532619 2086 ntBASIC16.95■□□□□ 0.3
TOP1P11387 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TOP1P11387 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.95■□□□□ 0.3
TOP1P11387 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TOP1P11387 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms