Protein–RNA interactions for Protein: P07196

NEFL, Neurofilament light polypeptide, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFLP07196 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NEFLP07196 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NEFLP07196 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEFLP07196 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NEFLP07196 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NEFLP07196 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.17■□□□□ 0.66
NEFLP07196 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.17■□□□□ 0.66
NEFLP07196 AL627223.1-201ENST00000416693 442 ntBASIC19.17■□□□□ 0.66
NEFLP07196 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.17■□□□□ 0.66
NEFLP07196 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
NEFLP07196 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.17■□□□□ 0.66
NEFLP07196 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.17■□□□□ 0.66
NEFLP07196 TIMM17BP1-201ENST00000545713 516 ntBASIC19.17■□□□□ 0.66
NEFLP07196 AC051619.7-201ENST00000568314 623 ntBASIC19.17■□□□□ 0.66
NEFLP07196 AC107373.2-201ENST00000607735 490 ntBASIC19.17■□□□□ 0.66
NEFLP07196 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.17■□□□□ 0.66
NEFLP07196 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC19.17■□□□□ 0.66
NEFLP07196 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEFLP07196 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NEFLP07196 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NEFLP07196 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NEFLP07196 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
NEFLP07196 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.16■□□□□ 0.66
NEFLP07196 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
NEFLP07196 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NEFLP07196 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.16■□□□□ 0.66
NEFLP07196 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.16■□□□□ 0.66
NEFLP07196 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.16■□□□□ 0.66
NEFLP07196 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.16■□□□□ 0.66
NEFLP07196 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.16■□□□□ 0.66
NEFLP07196 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NEFLP07196 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 MARK2P9-201ENST00000430958 1727 ntBASIC19.16■□□□□ 0.66
NEFLP07196 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NEFLP07196 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC19.16■□□□□ 0.66
NEFLP07196 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEFLP07196 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 AL031719.1-201ENST00000623365 2587 ntBASIC19.15■□□□□ 0.66
NEFLP07196 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.15■□□□□ 0.66
NEFLP07196 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NEFLP07196 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.15■□□□□ 0.66
NEFLP07196 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.15■□□□□ 0.66
NEFLP07196 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.15■□□□□ 0.66
NEFLP07196 MCCD1P2-201ENST00000423228 335 ntBASIC19.15■□□□□ 0.66
NEFLP07196 GPS2P2-201ENST00000430745 888 ntBASIC19.15■□□□□ 0.66
NEFLP07196 MKNK2P1-201ENST00000437526 628 ntBASIC19.15■□□□□ 0.66
NEFLP07196 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.15■□□□□ 0.66
NEFLP07196 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC19.15■□□□□ 0.66
NEFLP07196 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEFLP07196 AL928654.5-201ENST00000624831 2501 ntBASIC19.15■□□□□ 0.66
NEFLP07196 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms