Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 AC234783.1-201ENST00000441761 496 ntBASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAF3IP1Q8TDR0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 BOLA2P3-201ENST00000404566 256 ntBASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 HOMER2P2-201ENST00000451621 847 ntBASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 COX20P2-201ENST00000452636 358 ntBASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC005225.4-201ENST00000557330 545 ntBASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC064801.2-201ENST00000625052 1303 ntBASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAF3IP1Q8TDR0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 PDIA3P1-201ENST00000471856 1510 ntBASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAF3IP1Q8TDR0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms