Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDCP2Q5VXM1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 AC018442.1-201ENST00000421439 2061 ntBASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 AC010632.2-201ENST00000588369 1224 ntBASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 AC006548.2-201ENST00000605217 529 ntBASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 AC104506.1-201ENST00000609247 429 ntBASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 AL359091.4-201ENST00000610052 409 ntBASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
CDCP2Q5VXM1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.58□□□□□ -0.23
CDCP2Q5VXM1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.58□□□□□ -0.23
CDCP2Q5VXM1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CDCP2Q5VXM1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CDCP2Q5VXM1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 KRT18P46-201ENST00000435568 1279 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AC120057.1-201ENST00000483947 663 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AC008026.2-201ENST00000495438 348 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 TREHP1-201ENST00000531328 465 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 GOLGA2P7-209ENST00000560408 745 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AC013553.1-201ENST00000560906 267 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 CYP4F36P-201ENST00000589193 186 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 AP003392.6-201ENST00000607709 325 ntBASIC13.58□□□□□ -0.24
CDCP2Q5VXM1 HMGB1P24-201ENST00000611897 328 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms