Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PER3P56645 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PER3P56645 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PER3P56645 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PER3P56645 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
PER3P56645 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
PER3P56645 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PER3P56645 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
PER3P56645 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 AC055811.4-201ENST00000624039 1754 ntBASIC13.51□□□□□ -0.25
PER3P56645 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
PER3P56645 AL359881.3-201ENST00000602640 1721 ntBASIC13.51□□□□□ -0.25
PER3P56645 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 AC092978.1-202ENST00000637590 1327 ntBASIC13.51□□□□□ -0.25
PER3P56645 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 AC091046.1-201ENST00000331871 207 ntBASIC13.51□□□□□ -0.25
PER3P56645 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 AL136309.1-201ENST00000403917 691 ntBASIC13.51□□□□□ -0.25
PER3P56645 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
PER3P56645 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.51□□□□□ -0.25
PER3P56645 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.51□□□□□ -0.25
PER3P56645 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.51□□□□□ -0.25
PER3P56645 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.51□□□□□ -0.25
PER3P56645 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 AC005562.1-201ENST00000583030 3219 ntBASIC13.51□□□□□ -0.25
PER3P56645 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 MIR193BHG-211ENST00000641433 5365 ntBASIC13.51□□□□□ -0.25
PER3P56645 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PER3P56645 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.51□□□□□ -0.25
PER3P56645 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PER3P56645 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PER3P56645 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 PPT1-213ENST00000641319 2388 ntBASIC13.5□□□□□ -0.25
PER3P56645 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PER3P56645 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 AC089987.1-201ENST00000551654 2209 ntBASIC13.5□□□□□ -0.25
PER3P56645 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PER3P56645 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
PER3P56645 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms