Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CDH4P55283 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH4P55283 RN7SL258P-201ENST00000478664 300 ntBASIC14.72□□□□□ -0.05
CDH4P55283 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 AL512310.5-201ENST00000551999 515 ntBASIC14.72□□□□□ -0.05
CDH4P55283 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH4P55283 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH4P55283 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 AC097724.1-201ENST00000609581 426 ntBASIC14.72□□□□□ -0.05
CDH4P55283 LINC01783-202ENST00000614408 828 ntBASIC14.72□□□□□ -0.05
CDH4P55283 AL353770.1-201ENST00000614915 403 ntBASIC14.72□□□□□ -0.05
CDH4P55283 BX284668.2-205ENST00000619677 828 ntBASIC14.72□□□□□ -0.05
CDH4P55283 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH4P55283 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH4P55283 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDH4P55283 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDH4P55283 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 AC007952.5-201ENST00000572818 1486 ntBASIC14.71□□□□□ -0.05
CDH4P55283 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH4P55283 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH4P55283 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH4P55283 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH4P55283 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 RPS9P1-201ENST00000419943 583 ntBASIC14.71□□□□□ -0.05
CDH4P55283 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH4P55283 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.71□□□□□ -0.05
CDH4P55283 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 CHMP4BP1-201ENST00000556017 588 ntBASIC14.71□□□□□ -0.05
CDH4P55283 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH4P55283 MIR4754-201ENST00000582477 89 ntBASIC14.71□□□□□ -0.05
CDH4P55283 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 AL021578.1-201ENST00000613646 709 ntBASIC14.71□□□□□ -0.05
CDH4P55283 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH4P55283 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH4P55283 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
CDH4P55283 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CDH4P55283 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH4P55283 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH4P55283 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH4P55283 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CDH4P55283 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CDH4P55283 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDH4P55283 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.71□□□□□ -0.06
CDH4P55283 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH4P55283 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
CDH4P55283 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDH4P55283 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDH4P55283 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH4P55283 AC023908.3-201ENST00000564211 3047 ntBASIC14.7□□□□□ -0.06
CDH4P55283 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH4P55283 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms