Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.36□□□□□ -0.27
THBS1P07996 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 AL008718.2-201ENST00000609206 1313 ntBASIC13.36□□□□□ -0.27
THBS1P07996 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 ST20-AS1-201ENST00000560255 4223 ntBASIC13.35□□□□□ -0.27
THBS1P07996 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.35□□□□□ -0.27
THBS1P07996 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.35□□□□□ -0.27
THBS1P07996 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.35□□□□□ -0.27
THBS1P07996 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.35□□□□□ -0.27
THBS1P07996 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.35□□□□□ -0.27
THBS1P07996 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 AP006547.1-201ENST00000563435 692 ntBASIC13.35□□□□□ -0.27
THBS1P07996 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.35□□□□□ -0.27
THBS1P07996 BAP1-211ENST00000615113 489 ntBASIC13.35□□□□□ -0.27
THBS1P07996 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
THBS1P07996 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
THBS1P07996 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
THBS1P07996 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
THBS1P07996 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS1P07996 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS1P07996 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS1P07996 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms