Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 AC074138.1-201ENST00000611182 1303 ntBASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 AP000356.3-201ENST00000382243 753 ntBASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 KHSRPP1-201ENST00000427983 1768 ntBASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.18■□□□□ 0.02
SHKBP1Q8TBC3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 MIR557-201ENST00000385239 98 ntBASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 RPSAP15-201ENST00000448168 861 ntBASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 AC242376.2-201ENST00000619355 883 ntBASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms