Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNQ4P56696 MIR4254-201ENST00000581063 76 ntBASIC18.09■□□□□ 0.49
KCNQ4P56696 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.09■□□□□ 0.49
KCNQ4P56696 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.09■□□□□ 0.49
KCNQ4P56696 AL031673.1-201ENST00000611460 466 ntBASIC18.09■□□□□ 0.49
KCNQ4P56696 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNQ4P56696 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNQ4P56696 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KCNQ4P56696 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.09■□□□□ 0.49
KCNQ4P56696 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KCNQ4P56696 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.09■□□□□ 0.49
KCNQ4P56696 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.09■□□□□ 0.49
KCNQ4P56696 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.08■□□□□ 0.49
KCNQ4P56696 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNQ4P56696 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNQ4P56696 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
KCNQ4P56696 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNQ4P56696 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.08■□□□□ 0.49
KCNQ4P56696 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
KCNQ4P56696 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KCNQ4P56696 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.08■□□□□ 0.49
KCNQ4P56696 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNQ4P56696 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 RN7SL351P-201ENST00000469306 248 ntBASIC18.08■□□□□ 0.48
KCNQ4P56696 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC18.08■□□□□ 0.48
KCNQ4P56696 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNQ4P56696 AC120498.7-201ENST00000562876 330 ntBASIC18.08■□□□□ 0.48
KCNQ4P56696 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNQ4P56696 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNQ4P56696 URAHP-205ENST00000610227 398 ntBASIC18.08■□□□□ 0.48
KCNQ4P56696 AC010531.8-201ENST00000623341 685 ntBASIC18.08■□□□□ 0.48
KCNQ4P56696 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.08■□□□□ 0.48
KCNQ4P56696 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.08■□□□□ 0.48
KCNQ4P56696 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
KCNQ4P56696 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.08■□□□□ 0.48
KCNQ4P56696 TBC1D27-202ENST00000424239 1573 ntBASIC18.08■□□□□ 0.48
KCNQ4P56696 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
KCNQ4P56696 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.08■□□□□ 0.48
KCNQ4P56696 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KCNQ4P56696 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.08■□□□□ 0.48
KCNQ4P56696 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
KCNQ4P56696 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
KCNQ4P56696 AC007952.5-201ENST00000572818 1486 ntBASIC18.07■□□□□ 0.48
KCNQ4P56696 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNQ4P56696 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KCNQ4P56696 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
KCNQ4P56696 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNQ4P56696 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNQ4P56696 DPY19L2P4-201ENST00000479881 442 ntBASIC18.07■□□□□ 0.48
KCNQ4P56696 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNQ4P56696 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
KCNQ4P56696 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNQ4P56696 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KCNQ4P56696 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNQ4P56696 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.06■□□□□ 0.48
KCNQ4P56696 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms