Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LAMA1P25391 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LAMA1P25391 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LAMA1P25391 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.73□□□□□ -0.21
LAMA1P25391 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.73□□□□□ -0.21
LAMA1P25391 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LAMA1P25391 LINC00552-201ENST00000625151 2579 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 KRT8P30-201ENST00000432100 650 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 AL136084.1-201ENST00000449172 318 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 RN7SL173P-201ENST00000461853 292 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.72□□□□□ -0.21
LAMA1P25391 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.72□□□□□ -0.21
LAMA1P25391 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
LAMA1P25391 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.72□□□□□ -0.21
LAMA1P25391 AL928654.5-201ENST00000624831 2501 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.72□□□□□ -0.21
LAMA1P25391 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 GUCY2EP-203ENST00000531117 1918 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
LAMA1P25391 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 AC090820.1-201ENST00000519722 591 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC13.72□□□□□ -0.21
LAMA1P25391 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 AC138627.1-201ENST00000641127 1257 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LAMA1P25391 HSPA8P5-201ENST00000456928 2069 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.72□□□□□ -0.21
LAMA1P25391 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 AC103563.1-201ENST00000429316 123 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 RPSAP12-201ENST00000435879 888 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.72□□□□□ -0.21
LAMA1P25391 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 AC006986.1-201ENST00000612764 241 ntBASIC13.72□□□□□ -0.21
LAMA1P25391 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.72□□□□□ -0.21
LAMA1P25391 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LAMA1P25391 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.72□□□□□ -0.21
LAMA1P25391 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LAMA1P25391 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.71□□□□□ -0.21
LAMA1P25391 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 AL050341.2-201ENST00000567508 1541 ntBASIC13.71□□□□□ -0.21
LAMA1P25391 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.71□□□□□ -0.21
LAMA1P25391 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.71□□□□□ -0.21
LAMA1P25391 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.71□□□□□ -0.21
LAMA1P25391 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.71□□□□□ -0.21
LAMA1P25391 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LAMA1P25391 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.71□□□□□ -0.21
LAMA1P25391 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.71□□□□□ -0.21
LAMA1P25391 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LAMA1P25391 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 CICP24-201ENST00000605464 2705 ntBASIC13.71□□□□□ -0.21
LAMA1P25391 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LAMA1P25391 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.71□□□□□ -0.21
LAMA1P25391 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LAMA1P25391 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.71□□□□□ -0.22
LAMA1P25391 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.71□□□□□ -0.22
LAMA1P25391 ZNF877P-201ENST00000437614 612 ntBASIC13.71□□□□□ -0.22
LAMA1P25391 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LAMA1P25391 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.71□□□□□ -0.22
LAMA1P25391 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LAMA1P25391 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms