Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMC1P11047 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMC1P11047 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMC1P11047 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
LAMC1P11047 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
LAMC1P11047 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMC1P11047 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 GEMIN8P4-201ENST00000380526 729 ntBASIC19.89■□□□□ 0.77
LAMC1P11047 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LAMC1P11047 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC19.89■□□□□ 0.77
LAMC1P11047 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMC1P11047 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.89■□□□□ 0.77
LAMC1P11047 KRT18P37-201ENST00000520711 1282 ntBASIC19.89■□□□□ 0.77
LAMC1P11047 AC132825.4-202ENST00000578792 434 ntBASIC19.89■□□□□ 0.77
LAMC1P11047 AC010632.2-201ENST00000588369 1224 ntBASIC19.89■□□□□ 0.77
LAMC1P11047 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 PTPN20CP-201ENST00000614090 920 ntBASIC19.89■□□□□ 0.77
LAMC1P11047 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LAMC1P11047 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMC1P11047 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LAMC1P11047 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.89■□□□□ 0.77
LAMC1P11047 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LAMC1P11047 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.89■□□□□ 0.77
LAMC1P11047 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 PTGER4P2-201ENST00000328411 252 ntBASIC19.88■□□□□ 0.77
LAMC1P11047 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LAMC1P11047 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC19.88■□□□□ 0.77
LAMC1P11047 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 BRI3P1-201ENST00000440440 378 ntBASIC19.88■□□□□ 0.77
LAMC1P11047 PTGER4P3-201ENST00000458150 252 ntBASIC19.88■□□□□ 0.77
LAMC1P11047 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC19.88■□□□□ 0.77
LAMC1P11047 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC19.88■□□□□ 0.77
LAMC1P11047 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 CYP4F36P-201ENST00000589193 186 ntBASIC19.88■□□□□ 0.77
LAMC1P11047 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
LAMC1P11047 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
LAMC1P11047 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LAMC1P11047 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.88■□□□□ 0.77
LAMC1P11047 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
LAMC1P11047 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 AL365181.1-201ENST00000564032 1828 ntBASIC19.88■□□□□ 0.77
LAMC1P11047 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LAMC1P11047 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LAMC1P11047 MIR566-201ENST00000385187 94 ntBASIC19.87■□□□□ 0.77
LAMC1P11047 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 HNRNPA1P58-201ENST00000403629 610 ntBASIC19.87■□□□□ 0.77
LAMC1P11047 OR2W2P-201ENST00000406313 909 ntBASIC19.87■□□□□ 0.77
LAMC1P11047 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.87■□□□□ 0.77
LAMC1P11047 TBC1D27-202ENST00000424239 1573 ntBASIC19.87■□□□□ 0.77
LAMC1P11047 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.87■□□□□ 0.77
LAMC1P11047 RN7SKP155-201ENST00000516031 288 ntBASIC19.87■□□□□ 0.77
LAMC1P11047 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LAMC1P11047 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC19.87■□□□□ 0.77
LAMC1P11047 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC19.87■□□□□ 0.77
LAMC1P11047 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19.87■□□□□ 0.77
LAMC1P11047 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LAMC1P11047 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.87■□□□□ 0.77
LAMC1P11047 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.87■□□□□ 0.77
LAMC1P11047 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
LAMC1P11047 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.87■□□□□ 0.77
LAMC1P11047 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC19.87■□□□□ 0.77
LAMC1P11047 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
LAMC1P11047 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LAMC1P11047 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.87■□□□□ 0.77
LAMC1P11047 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LAMC1P11047 GGTLC4P-201ENST00000402176 664 ntBASIC19.87■□□□□ 0.77
LAMC1P11047 NME6-208ENST00000435684 599 ntTSL 2 BASIC19.87■□□□□ 0.77
LAMC1P11047 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms