Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.37□□□□□ -0.27
THBS1P07996 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.37□□□□□ -0.27
THBS1P07996 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.37□□□□□ -0.27
THBS1P07996 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.37□□□□□ -0.27
THBS1P07996 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.37□□□□□ -0.27
THBS1P07996 AC023310.1-201ENST00000554836 735 ntBASIC13.37□□□□□ -0.27
THBS1P07996 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.37□□□□□ -0.27
THBS1P07996 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
THBS1P07996 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.37□□□□□ -0.27
THBS1P07996 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 AC015818.8-201ENST00000587907 1519 ntBASIC13.37□□□□□ -0.27
THBS1P07996 REXO1L6P-201ENST00000603433 1515 ntBASIC13.37□□□□□ -0.27
THBS1P07996 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THBS1P07996 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
THBS1P07996 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 AL157996.1-201ENST00000624684 2299 ntBASIC13.36□□□□□ -0.27
THBS1P07996 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 PDIA3P1-201ENST00000471856 1510 ntBASIC13.36□□□□□ -0.27
THBS1P07996 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 TMBIM7P-202ENST00000641474 1516 ntBASIC13.36□□□□□ -0.27
THBS1P07996 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.36□□□□□ -0.27
THBS1P07996 AL157407.1-201ENST00000435784 904 ntBASIC13.36□□□□□ -0.27
THBS1P07996 AL645933.1-201ENST00000440087 609 ntBASIC13.36□□□□□ -0.27
THBS1P07996 BNIP3P42-201ENST00000454982 569 ntBASIC13.36□□□□□ -0.27
THBS1P07996 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.36□□□□□ -0.27
THBS1P07996 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.36□□□□□ -0.27
THBS1P07996 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.36□□□□□ -0.27
THBS1P07996 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 AL583810.1-201ENST00000553344 1045 ntBASIC13.36□□□□□ -0.27
THBS1P07996 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
THBS1P07996 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.36□□□□□ -0.27
THBS1P07996 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.36□□□□□ -0.27
THBS1P07996 RN7SL440P-201ENST00000577855 343 ntBASIC13.36□□□□□ -0.27
THBS1P07996 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.36□□□□□ -0.27
THBS1P07996 BNIP3P29-201ENST00000598302 571 ntBASIC13.36□□□□□ -0.27
THBS1P07996 MIR6720-201ENST00000611664 98 ntBASIC13.36□□□□□ -0.27
THBS1P07996 AC011447.5-201ENST00000616168 564 ntBASIC13.36□□□□□ -0.27
THBS1P07996 AC008687.7-202ENST00000637404 953 ntBASIC13.36□□□□□ -0.27
THBS1P07996 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THBS1P07996 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms