Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.54■□□□□ 0.56
LTN1O94822 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC18.54■□□□□ 0.56
LTN1O94822 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.54■□□□□ 0.56
LTN1O94822 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC18.54■□□□□ 0.56
LTN1O94822 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC18.54■□□□□ 0.56
LTN1O94822 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 PRMT1P1-201ENST00000604252 1009 ntBASIC18.54■□□□□ 0.56
LTN1O94822 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.54■□□□□ 0.56
LTN1O94822 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTN1O94822 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.54■□□□□ 0.56
LTN1O94822 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LTN1O94822 GOLGA8VP-201ENST00000559009 1798 ntBASIC18.53■□□□□ 0.56
LTN1O94822 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC18.53■□□□□ 0.56
LTN1O94822 AC092810.2-201ENST00000431570 362 ntBASIC18.53■□□□□ 0.56
LTN1O94822 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC18.53■□□□□ 0.56
LTN1O94822 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 AC113385.2-201ENST00000614465 762 ntBASIC18.53■□□□□ 0.56
LTN1O94822 MIR8071-1-201ENST00000616769 65 ntBASIC18.53■□□□□ 0.56
LTN1O94822 MIR8071-2-201ENST00000616772 65 ntBASIC18.53■□□□□ 0.56
LTN1O94822 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LTN1O94822 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.53■□□□□ 0.56
LTN1O94822 AC139713.2-207ENST00000641556 1292 ntBASIC18.53■□□□□ 0.56
LTN1O94822 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 HSPA7-201ENST00000445535 1927 ntBASIC18.53■□□□□ 0.56
LTN1O94822 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 RPL10-203ENST00000406022 748 ntTSL 3 BASIC18.53■□□□□ 0.56
LTN1O94822 CDCA4P4-201ENST00000435216 680 ntBASIC18.53■□□□□ 0.56
LTN1O94822 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.53■□□□□ 0.56
LTN1O94822 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LTN1O94822 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LTN1O94822 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTN1O94822 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC18.53■□□□□ 0.56
LTN1O94822 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.53■□□□□ 0.56
LTN1O94822 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTN1O94822 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTN1O94822 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LTN1O94822 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LTN1O94822 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
LTN1O94822 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC18.52■□□□□ 0.56
LTN1O94822 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTN1O94822 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTN1O94822 AC140479.7-201ENST00000636301 2332 ntBASIC18.52■□□□□ 0.56
LTN1O94822 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.52■□□□□ 0.56
LTN1O94822 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTN1O94822 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTN1O94822 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LTN1O94822 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LTN1O94822 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 PGK1P2-201ENST00000431702 1214 ntBASIC18.52■□□□□ 0.55
LTN1O94822 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.52■□□□□ 0.55
LTN1O94822 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC18.52■□□□□ 0.55
LTN1O94822 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 BAK1P2-201ENST00000532665 631 ntBASIC18.52■□□□□ 0.55
LTN1O94822 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms