Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.36□□□□□ -0.11
TLR4O00206 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.36□□□□□ -0.11
TLR4O00206 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.36□□□□□ -0.11
TLR4O00206 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 PGAM1P5-201ENST00000548011 764 ntBASIC14.36□□□□□ -0.11
TLR4O00206 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.36□□□□□ -0.11
TLR4O00206 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.36□□□□□ -0.11
TLR4O00206 NPM1P43-201ENST00000558669 786 ntBASIC14.36□□□□□ -0.11
TLR4O00206 AC093752.3-201ENST00000567343 901 ntBASIC14.36□□□□□ -0.11
TLR4O00206 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.36□□□□□ -0.11
TLR4O00206 MIR4750-201ENST00000584564 56 ntBASIC14.36□□□□□ -0.11
TLR4O00206 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 SIGLEC18P-201ENST00000602271 909 ntBASIC14.36□□□□□ -0.11
TLR4O00206 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TLR4O00206 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.36□□□□□ -0.11
TLR4O00206 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.36□□□□□ -0.11
TLR4O00206 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TLR4O00206 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TLR4O00206 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.36□□□□□ -0.11
TLR4O00206 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TLR4O00206 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.36□□□□□ -0.11
TLR4O00206 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.35□□□□□ -0.11
TLR4O00206 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.35□□□□□ -0.11
TLR4O00206 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 OR2R1P-201ENST00000441404 914 ntBASIC14.35□□□□□ -0.11
TLR4O00206 RPL7P35-201ENST00000446943 740 ntBASIC14.35□□□□□ -0.11
TLR4O00206 DUTP3-201ENST00000450025 415 ntBASIC14.35□□□□□ -0.11
TLR4O00206 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.35□□□□□ -0.11
TLR4O00206 AP002803.1-201ENST00000528836 498 ntBASIC14.35□□□□□ -0.11
TLR4O00206 AC138894.2-201ENST00000602838 371 ntBASIC14.35□□□□□ -0.11
TLR4O00206 AC242376.2-201ENST00000619355 883 ntBASIC14.35□□□□□ -0.11
TLR4O00206 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TLR4O00206 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.35□□□□□ -0.11
TLR4O00206 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TLR4O00206 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
TLR4O00206 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.35□□□□□ -0.11
TLR4O00206 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TLR4O00206 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TLR4O00206 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 AL512430.1-201ENST00000392575 860 ntBASIC14.34□□□□□ -0.11
TLR4O00206 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms