Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AC006335.1-201ENST00000445200 547 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 MIR3907-201ENST00000579424 151 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 RN7SL190P-201ENST00000582519 257 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AP000346.4-201ENST00000614827 381 ntBASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA3F8WFD2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AC015688.4-201ENST00000580780 1647 ntBASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AC007274.2-201ENST00000421675 662 ntBASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AL157407.1-201ENST00000435784 904 ntBASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 TPT1P11-201ENST00000458482 498 ntBASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 AL353726.2-201ENST00000623259 884 ntBASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA3F8WFD2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 HINT2P1-201ENST00000419438 481 ntBASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 ISCA2P1-201ENST00000425548 448 ntBASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 AL596276.2-201ENST00000447525 331 ntBASIC13.21□□□□□ -0.29
NPIPA3F8WFD2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms