Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 MIR3147-201ENST00000577811 66 ntBASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 MIR3677-201ENST00000578964 60 ntBASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 AC011491.1-203ENST00000637688 543 ntBASIC17.5■□□□□ 0.39
RPAP1Q9BWH6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 FRMPD2B-201ENST00000431305 1347 ntBASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 RBM8B-201ENST00000555532 525 ntBASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPAP1Q9BWH6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 TMBIM7P-202ENST00000641474 1516 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 FAM90A2P-201ENST00000511144 1395 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 FAM90A25P-201ENST00000528404 1395 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 OR2K2-202ENST00000374428 1038 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 RPSAP31-201ENST00000416648 895 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 XBP1P1-201ENST00000436573 652 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
RPAP1Q9BWH6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms