Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL157791.1-201ENST00000553667 1699 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 AC099063.4-201ENST00000641099 1602 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 MIR769-201ENST00000390225 118 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 CYP46A4P-201ENST00000414953 267 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 RN7SL11P-201ENST00000471305 293 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 AL139099.5-201ENST00000635274 300 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 AC012617.1-204ENST00000586340 2305 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.93□□□□□ -0.02
RPRD1AQ96P16 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPRD1AQ96P16 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 AC090857.1-201ENST00000527400 390 ntBASIC14.92□□□□□ -0.02
RPRD1AQ96P16 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 RN7SL774P-201ENST00000577467 290 ntBASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 KRT8P21-201ENST00000430398 1491 ntBASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RPRD1AQ96P16 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms