Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM11BQ8TCY0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM11BQ8TCY0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMIM11BQ8TCY0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AL645937.2-201ENST00000396808 931 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AL031284.1-201ENST00000419297 478 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC007969.1-201ENST00000433675 447 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MTND6P24-201ENST00000440466 518 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC093909.1-201ENST00000504731 1122 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 KRT8P48-201ENST00000515599 1220 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SORD2P-201ENST00000558556 1069 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC018529.1-201ENST00000613063 361 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC084121.4-201ENST00000641598 221 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AF228730.8-201ENST00000642140 221 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC093525.8-201ENST00000624099 1342 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AL359845.1-201ENST00000458202 1648 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 CIC-204ENST00000572681 8218 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC026271.4-201ENST00000578214 1833 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AC115284.2-201ENST00000624646 2054 ntBASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMIM11BQ8TCY0 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMIM11BQ8TCY0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms