Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 KRT8P19-201ENST00000551916 1455 ntBASIC12.26□□□□□ -0.45
COL8A2P25067 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.26□□□□□ -0.45
COL8A2P25067 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.26□□□□□ -0.45
COL8A2P25067 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
COL8A2P25067 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 KRT18P36-201ENST00000411618 1276 ntBASIC12.25□□□□□ -0.45
COL8A2P25067 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.25□□□□□ -0.45
COL8A2P25067 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.25□□□□□ -0.45
COL8A2P25067 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 POU5F1P2-201ENST00000521750 823 ntBASIC12.25□□□□□ -0.45
COL8A2P25067 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 RTN3P1-201ENST00000536295 711 ntBASIC12.25□□□□□ -0.45
COL8A2P25067 AC003686.1-201ENST00000550956 1034 ntBASIC12.25□□□□□ -0.45
COL8A2P25067 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 MIR3907-201ENST00000579424 151 ntBASIC12.25□□□□□ -0.45
COL8A2P25067 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
COL8A2P25067 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.25□□□□□ -0.45
COL8A2P25067 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.25□□□□□ -0.45
COL8A2P25067 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.25□□□□□ -0.45
COL8A2P25067 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
COL8A2P25067 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.25□□□□□ -0.45
COL8A2P25067 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.25□□□□□ -0.45
COL8A2P25067 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
COL8A2P25067 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 AC107918.4-201ENST00000641966 3141 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms