Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.21□□□□□ -0.45
GAPDHP04406 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 AC005229.1-201ENST00000392885 409 ntBASIC12.21□□□□□ -0.45
GAPDHP04406 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.21□□□□□ -0.45
GAPDHP04406 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
GAPDHP04406 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 TTTY23B-201ENST00000442790 549 ntBASIC12.21□□□□□ -0.45
GAPDHP04406 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.21□□□□□ -0.45
GAPDHP04406 AC026434.2-201ENST00000506094 1078 ntBASIC12.21□□□□□ -0.45
GAPDHP04406 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
GAPDHP04406 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
GAPDHP04406 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.21□□□□□ -0.45
GAPDHP04406 AL022328.1-201ENST00000610050 478 ntBASIC12.21□□□□□ -0.45
GAPDHP04406 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.21□□□□□ -0.45
GAPDHP04406 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
GAPDHP04406 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.21□□□□□ -0.46
GAPDHP04406 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GAPDHP04406 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
GAPDHP04406 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.21□□□□□ -0.46
GAPDHP04406 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
GAPDHP04406 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
GAPDHP04406 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
GAPDHP04406 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
GAPDHP04406 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
GAPDHP04406 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
GAPDHP04406 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 NME2P1-201ENST00000426182 414 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 C2orf27AP3-201ENST00000434123 579 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.2□□□□□ -0.46
GAPDHP04406 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 SLC25A47P1-201ENST00000531577 414 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 CR383656.12-201ENST00000549567 513 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.2□□□□□ -0.46
GAPDHP04406 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.2□□□□□ -0.46
GAPDHP04406 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 AL354718.3-201ENST00000616414 581 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 AC132938.4-201ENST00000623835 848 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 CR382287.1-201ENST00000623954 586 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.2□□□□□ -0.46
GAPDHP04406 AC105233.6-201ENST00000642093 218 ntBASIC12.2□□□□□ -0.46
GAPDHP04406 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.2□□□□□ -0.46
GAPDHP04406 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.2□□□□□ -0.46
GAPDHP04406 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.2□□□□□ -0.46
GAPDHP04406 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
GAPDHP04406 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms