Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.51■□□□□ 0.07
HOXC8P31273 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.51■□□□□ 0.07
HOXC8P31273 VENTXP3-201ENST00000546480 773 ntBASIC15.51■□□□□ 0.07
HOXC8P31273 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.51■□□□□ 0.07
HOXC8P31273 TRMT112P3-201ENST00000580149 358 ntBASIC15.51■□□□□ 0.07
HOXC8P31273 AC055811.3-201ENST00000584952 686 ntBASIC15.51■□□□□ 0.07
HOXC8P31273 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.51■□□□□ 0.07
HOXC8P31273 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.5■□□□□ 0.07
HOXC8P31273 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HOXC8P31273 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.5■□□□□ 0.07
HOXC8P31273 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HOXC8P31273 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
HOXC8P31273 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.5■□□□□ 0.07
HOXC8P31273 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 OR7E115P-201ENST00000382617 1024 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 EEF1DP2-201ENST00000433698 843 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.5■□□□□ 0.07
HOXC8P31273 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.5■□□□□ 0.07
HOXC8P31273 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.5■□□□□ 0.07
HOXC8P31273 RN7SKP155-201ENST00000516031 288 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 RN7SL556P-201ENST00000582856 298 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 AL049840.2-201ENST00000602722 535 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 AC010976.2-201ENST00000609697 852 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 AC006483.2-201ENST00000609813 515 ntBASIC15.5■□□□□ 0.07
HOXC8P31273 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HOXC8P31273 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HOXC8P31273 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.5■□□□□ 0.07
HOXC8P31273 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HOXC8P31273 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.5■□□□□ 0.07
HOXC8P31273 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HOXC8P31273 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HOXC8P31273 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HOXC8P31273 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.5■□□□□ 0.07
HOXC8P31273 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HOXC8P31273 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.49■□□□□ 0.07
HOXC8P31273 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HOXC8P31273 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.49■□□□□ 0.07
HOXC8P31273 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.49■□□□□ 0.07
HOXC8P31273 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HOXC8P31273 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 AL590824.1-201ENST00000403828 1349 ntBASIC15.49■□□□□ 0.07
HOXC8P31273 TUBB8P4-201ENST00000511806 1324 ntBASIC15.49■□□□□ 0.07
HOXC8P31273 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.49■□□□□ 0.07
HOXC8P31273 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HOXC8P31273 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.49■□□□□ 0.07
HOXC8P31273 OR2W2P-201ENST00000406313 909 ntBASIC15.49■□□□□ 0.07
HOXC8P31273 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.49■□□□□ 0.07
HOXC8P31273 KRT18P46-201ENST00000435568 1279 ntBASIC15.49■□□□□ 0.07
HOXC8P31273 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HOXC8P31273 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.49■□□□□ 0.07
HOXC8P31273 RN7SL582P-201ENST00000491078 279 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms