Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCA3PQ9Y6N3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCA3PQ9Y6N3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CLCA3PQ9Y6N3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CLCA3PQ9Y6N3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
CLCA3PQ9Y6N3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLCA3PQ9Y6N3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLCA3PQ9Y6N3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 AL356740.2-201ENST00000601559 647 ntBASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.32■■□□□ 1
CLCA3PQ9Y6N3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLCA3PQ9Y6N3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCA3PQ9Y6N3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CLCA3PQ9Y6N3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCA3PQ9Y6N3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CLCA3PQ9Y6N3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.3■■□□□ 1
CLCA3PQ9Y6N3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.3■■□□□ 1
CLCA3PQ9Y6N3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 AL117332.1-201ENST00000622628 974 ntBASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLCA3PQ9Y6N3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 MIR3621-201ENST00000580529 85 ntBASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLCA3PQ9Y6N3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CLCA3PQ9Y6N3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms